Hey Matt, I can help you with switching the format around to cater to your needs, just PM me or something,. Glad to hear about the gains you are making! I think that training format is one of the best out there! I am at 100 pages on my new book which is focused on that specific training block (and a ton of other things) should be done within a month!
Raptor, we need to get that knee of yours fixed up! You can just bound on your off good leg, and maybe do a bunch of double leg stuff aside from that on the plyo days. Honestly, you don't even have to bound a ton on the plyo days, just substitute speed work in instead, like 2x20m, 3x30m, 2x40m, and then do a bunch of double leg stuff and use the power jumper from time to time. You can also do med ball or shot throws with powerful hip extension, that is great too. It is more the format of the days the exercises are presented, and not quite as much the exercises themselves.
J